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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs17834014 chr14:59816026 A/G 0.000221 486 16.3 15 5.8 KM Plot
THCA rs17836222 chr14:36225260 C/G 5.08E-6 490 10.4 15.98 15.97 KM Plot
THCA rs17846973 chr2:241533934 T/C 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs17879726 chr10:81698723 G/A 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs17880086 chr10:81703490 G/A 0.000112 487 16.08 15.9 9.77 KM Plot
THCA rs17881215 chr10:104629236 G/C 5.11E-8 483 15.83 16.52 19.1 KM Plot
THCA rs17881828 chr10:81695924 G/A 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs17882560 chr10:104650630 G/A 2.9E-8 488 15.48 17.33 19.1 KM Plot
THCA rs17883671 chr10:81695193 C/T 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs17884637 chr10:81687922 G/C 0.000114 484 16.08 16.57 9.77 KM Plot
THCA rs17885031 chr10:81696091 G/A 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs1788770 chr18:21169628 G/C 1.19E-6 475 15.63 16.83 14.15 KM Plot
THCA rs1788774 chr18:21167493 C/T 1.53E-6 490 14.15 16.83 15.68 KM Plot
THCA rs1792774 chr11:104912553 C/T 1.71E-6 488 15.9 16.4 11.47 KM Plot
THCA rs1800937 chr2:48025764 C/T 1.4E-7 481 15.3 17.38 8.27 KM Plot